• Level of study

    BAC +2

  • ECTS

    2 credits

  • Component

    Faculty of Science

Description

1- Linux basics (1,5h CM + 3hTD): Basic commands to navigate under Linux and understand the logic of this language. Small exercises to extract information in bash/shell. Element used for the analysis of alignment files.

2- Database (3h CM + 4,5hTD): know the main bibliographic and biological databases (NCBI, Ensembl, Galaxie...). Know how to make relevant and efficient queries, exploit, sort, description of the different formats

3- Sequence analysis (1,5hCM + 4,5H TD): Alignment and comparison of sequences with a small introduction to phylogeny (dot plot, Blast ...)

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Objectives

- Basics on the computer tools that are essential in biology today

- Learning to use a common query language (basics)

- Analysis and extraction of biological data made available to the scientific community on the web

- Research of scientific information and biological data for the understanding of a project

 

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Necessary pre-requisites

PIX certification (L1-S2 or L2-S3)

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